The Fountain Group · 20 hours ago
Biomedical Knowledge Systems Engineer (Part-time Hours)
United States
Part-time, Contract
Remote
Mid Level
$39.93/hr - $39.93/hr
3+ years expThe Fountain Group is seeking a Biomedical Knowledge Systems Engineer to manage and enhance applications for their scientific knowledge discovery platform. The role involves overseeing legacy systems, executing data migrations, and developing GenAI-driven applications while ensuring regulatory compliance.
ConsultingRecruitingStaffing Agency
Responsibilities
Independently manage, maintain, and evolve our custom semantic scientific search platform, performing high-level refactoring, troubleshooting, and architectural upgrades as necessary
Provide comprehensive administrative, operational, and development support for legacy biomedical informatics systems, including the Gene-Disease Association Knowledgebase and FDA Label Search, requiring extensive familiarity with their unique data models and workflows
Architect and execute complex data migrations, including document and vector database transformations from MarkLogic to MongoDB, while ensuring absolute preservation of biomedical metadata fidelity and auditability in compliance with regulatory standards
Design, build, and optimize scalable GenAI-based applications (leveraging frameworks such as vue.js) to expand automated scientific knowledge extraction, semantic enrichment, and cross-source information synthesis
Provide analytical and technical leadership on automated conversion of clinical trial results into regulatory-compliant FDA submission templates, integrating data from multiple sources
Lead ongoing modernization strategies by advising on best-practices for system interoperability, performance tuning, and secure deployment in hybrid cloud environments
Qualification
Required
Bachelor's degree in Computer Science, Bioinformatics, or a related discipline, with a minimum of 3 years' dedicated experience in software development and highly specialized biomedical system administration
Hands-on experience with both MarkLogic and MongoDB document databases
Demonstrated proficiency in advanced AWS services (Secrets Manager, Elastic Beanstalk, EC2)
Expertise with NLM biomedical data infrastructures (including PubMed, PMC, and Gene Expression Omnibus)
Experience with NLP, GenAI, LLM agentic frameworks applied to real-world biomedical use-cases
Highly proficient in full-stack engineering, with significant track record in modern frontend frameworks (including vue.js or equivalent), backend API design, and cloud-based microservices architecture tailored to scientific workflows
Company
The Fountain Group
The Fountain Group is a staffing firm that specializes in rendering contingent workforce solutions to various industries.
501-1000 employees
H1B Sponsorship
The Fountain Group has a track record of offering H1B sponsorships. Please note that this does not
guarantee sponsorship for this specific role. Below presents additional info for your
reference. (Data Powered by US Department of Labor)
Distribution of Different Job Fields Receiving Sponsorship
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Trends of Total Sponsorships
2025 (52)
2024 (34)
2023 (21)
2022 (42)
2021 (41)
2020 (14)
Funding
Current Stage
Late StageLeadership Team
Jahnavi Patel
Finance Business Partner
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